org.biomage.Description
Class ExternalReference

java.lang.Object
  |
  +--org.biomage.Common.Extendable
        |
        +--org.biomage.Description.ExternalReference

All Implemented Interfaces:

HasPropertySets, java.io.Serializable

public class ExternalReference

extends Extendable

implements java.io.Serializable

A reference to the originating source for the object.

See Also:

Serialized Form

Nested Class Summary

Nested classes inherited from class org.biomage.Interface.HasPropertySets

HasPropertySets.PropertySets_list

Field Summary

Fields inherited from class org.biomage.Common.Extendable

propertySets

Constructor Summary

ExternalReference()
Default constructor.

ExternalReference(org.xml.sax.Attributes atts)
Attribute constructor.

Method Summary

java.lang.String	getExportedFromDB() Get method for exportedFromDB
java.lang.String	getExportedFromServer() Get method for exportedFromServer
java.lang.String	getExportID() Get method for exportID
java.lang.String	getExportName() Get method for exportName
void	setExportedFromDB(java.lang.String exportedFromDB) Set method for exportedFromDB
void	setExportedFromServer(java.lang.String exportedFromServer) Set method for exportedFromServer
void	setExportID(java.lang.String exportID) Set method for exportID
void	setExportName(java.lang.String exportName) Set method for exportName
void	writeAssociations(java.io.Writer out) writeAssociations This method is responsible for assembling the association data into XML.
void	writeAttributes(java.io.Writer out) writeAttributes This method is responsible for assembling the attribute data into XML.
void	writeMAGEML(java.io.Writer out) writeMAGEML This method is responsible for assembling the attribute and association data into XML.

Methods inherited from class org.biomage.Common.Extendable

addToPropertySets, addToPropertySets, getFromPropertySets, getPropertySets, removeElementAtFromPropertySets, removeFromPropertySets, setPropertySets

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExternalReference

public ExternalReference()

Default constructor.

ExternalReference

public ExternalReference(org.xml.sax.Attributes atts)

Attribute constructor. Looks up the attributes in the parameter and casts them from strings appropriately

Method Detail

writeMAGEML

public void writeMAGEML(java.io.Writer out)
                 throws java.io.IOException

writeMAGEML This method is responsible for assembling the attribute and association data into XML. It creates the object tag and then calls the writeAttributes and writeAssociation methods.

Overrides:

writeMAGEML in class Extendable

java.io.IOException

writeAttributes

public void writeAttributes(java.io.Writer out)
                     throws java.io.IOException

writeAttributes This method is responsible for assembling the attribute data into XML. It calls the super method to write out all attributes of this class and it's ancestors.

Overrides:

writeAttributes in class Extendable

java.io.IOException

writeAssociations

public void writeAssociations(java.io.Writer out)
                       throws java.io.IOException

writeAssociations This method is responsible for assembling the association data into XML. It calls the super method to write out all associations of this class's ancestors.

Overrides:

writeAssociations in class Extendable

java.io.IOException

setExportedFromServer

public void setExportedFromServer(java.lang.String exportedFromServer)

Set method for exportedFromServer

getExportedFromServer

public java.lang.String getExportedFromServer()

Get method for exportedFromServer

Returns:

value of the attribute

setExportedFromDB

public void setExportedFromDB(java.lang.String exportedFromDB)

Set method for exportedFromDB

getExportedFromDB

public java.lang.String getExportedFromDB()

Get method for exportedFromDB

Returns:

value of the attribute

setExportID

public void setExportID(java.lang.String exportID)

Set method for exportID

getExportID

public java.lang.String getExportID()

Get method for exportID

Returns:

value of the attribute

setExportName

public void setExportName(java.lang.String exportName)

Set method for exportName

getExportName

public java.lang.String getExportName()

Get method for exportName

Returns:

value of the attribute