MAGE Software

Projects   ::  Software   ::  Ontologies   ::  MGED.org	November 21, 2024

Software Home    ::   MAGE-stk    ::   MAGE-OM    ::   MAGE-ML    ::   Examples    ::   Presentations    ::   OMG

You can download the following information from this site:

• MAGE-OM: the MAGE Object Model

  • XML format (compressed 81k)
  • Rose format (compressed 150k)
  • PNG Images (compressed 209k)
  • Latest RFP Document (MAGE-ML v1.1, approved by OMG June 2003) in gzipped Word document format (798k)

• MAGE-ML DTD: MAGE Markup Language Document Type Definition

  • MAGE-ML.dtd URLs:
    These link to uncompressed versions of the DTD, suitable for inclusion within the DTD element of a MAGE-ML file. Access to the 1.0 version can be obtained by changing "1.1" to "1.0" in the URL. These URLs point to equivalent documents, but the mged.sourceforge.net website is probably more reliable and therefore recommended:

    http://mged.sourceforge.net/dtd/1.1/MAGE-ML.dtd
    or
    http://schema.omg.org/lsr/gene_expression/1.1/MAGE-ML.dtd

  • MAGE-ML.dtd (latest version, compressed 28k)
  • MAGE-ML-2002-01-07.dtd (OMG adopted version 7 Jan 2002, compressed 28k)
  • example XML files (compressed 38k)

• MAGE Presentations

  • "OMG/I3C MAGE Presentation", Michael Miller, OMG/I3C Joint Meeting, Burlingame (2003-01) OMGI3C_MAGE_2003_01_29.ppt (545k)
  • "MGED Ontology", Angel Pizarro, Jamboree 4 (2002-12) angel_MGEDOntology.ppt (1666k)
  • "Minimal Information Annotating Microarray Experiments", Cathy Ball, Jamboree 4 (2002-12) jamboree_miame_2002.ppt (144k)
  • "Exporting MAGE-ML from the Stanford Microarray Database Using Perl MAGE-stk", Jeremy Gollub & Tina Boussard, Jamboree 4 (2002-12) jamboree_2002cb.ppt (132k)
  • Jason Stewart's EBI workshop (2001-12) EBI-2001-12-v2.ppt (90k)

• MAGE-Related Documents

  • Gene Expression Query RFP
  • Life Science ID RFP (Draft)

The official versions of the OMG adopted MAGE-OM files are available from the files section of www.sourceforge.net/projects/mged. These are the files dated 2002-09-10 in the "OMG Model" section.

Contentmaster: mged-mage@lists.sf.net   ::   Webmaster: jason_e_stewart@sf.net  ::  Site Design by Nelson Axelrod

This site is hosted by: